cp_addurls_GO.Rdadd uris to to cp table outputs
cp_addurls_GO( data, caption, coreEnrichment = "core_enrichment", signif2 = c("NES", "pvalue", "FDR"), gocarts = "http://amigo.geneontology.org/amigo/term/", genecarts = "https://www.ncbi.nlm.nih.gov/gene/" )
| data | dataframe |
|---|---|
| caption | table caption |
| coreEnrichment | column with core enrichments |
| signif2 | which columns contains digits to round to significance 2. |
| gocarts | default http://amigo.geneontology.org/amigo/term/ |
| genecarts | default https://www.ncbi.nlm.nih.gov/gene/ |
Other clusterProfiler:
cp_clusterDPAEuclideanDist(),
cp_clusterHClustEuclideanDistDeepslit(),
cp_clusterHClustEuclideanDist(),
cp_compClust(),
cp_filterforNA()