For more details and references see package vignette
vignette("TargetDecoyFDR_Example", package = "prozor")
plotFDR(data)
data | data returned by computeFDR function |
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creates a plot
#library(prozor) data(fdrSample) fdr1 <- computeFDRwithID(fdrSample$score, fdrSample$proteinID, larger_better = FALSE) fdr2 <- computeFDRwithID(fdrSample$score2, fdrSample$proteinID, larger_better = TRUE) plotFDR(fdr1) plotFDR(fdr2) data<-fdr1