get fgsea compatible rank list from data.frame

get fgsea compatible rank list from data.frame

fgsea_rank(df, ids = "X1", score = "X2")

Arguments

df

data frame
ids

column with ids
score

column with scores

See also

Other fgsea: fgsea_leading_edge_too_char(), fgsea_msigdb_collections(), fgsea_msigdb(), fgsea_rank_contrasts(), getMsigdbGenesets(), run_fgsea_for_allContrasts(), run_fgsea_for_allGeneSets()